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Project TitleHMC IdentifierKeywordsCohort SizeDiseasesGroupsSamples collectedOmics availableOmics sub-types
Targeting SS18::SSX Biology In Synovial SarcomagenesisHMC000061Synovial Sarcoma, Epigenetics, cancer, fusion oncoprotein53cancer, synovial sarcomaSynovial Sarcoma Diagnosis, Non-Synovial Sarcoma DiagnosisBCOR-rearranged sarcoma, Synovial sarcomaEpigenomics, Genomics, TranscriptomicsChIP-seq for H2AK119Ub1 (histone modification), ChIP-seq for H3K27ac (histone modification), ChIP-seq for H3K27me3 (histone modification), ChIP-seq for H3K36me2 (histone modification), ChIP-seq for H3K36me3 (histone modification), ChIP-seq for H3K4me1 (histone modification), ChIP-seq for H3K4me3 (histone modification), ChIP-seq for H3K9me3 (histone modification), DNA Methylation: WGBS (Whole Genome Bisulfite Sequencing), Duet evoC (genome, 5mc, 5hm sequencing), RNA-seq, Single Cell Chromatin Accessibility Sequencing (scATAC), Whole Genome Sequencing (WGS)
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